Issue table of contents

International Journal of Systematic and Evolutionary Microbiology — Volume 49, Issue 4

78 articles in this issue

International Committee on Systematic Bacteriology International Journal of Systematic Bacteriology will become International Journal of Systematic and Evolutionary Microbiology from January 2000

Stackebrandt, Erko, Tindall, Brian J.

p. 1323 https://doi.org/10.1099/00207713-49-4-1323

Validation List Number 71: Validation of publication of new names and new combinations previously effectively published outside the IJSB -- 49 (4): 1325 -- International Journal of Systematic and Evolutionary Microbiology

p. 1325

Notification that new names and new combinations have appeared in volume 49, part 3, of the IJSB

p. 1327 https://doi.org/10.1099/00207713-49-4-1327

Treponema lecithinolyticum sp. nov., a small saccharolytic spirochaete with phospholipase A and C activities associated with periodontal diseases

Wyss, C, Choi, BK, Schupbach, P, Moter, A, Guggenheim, B, Gobel, UB

p. 1329

Shewanella pealeana sp. nov., a member of the microbial community associated with the accessory nidamental gland of the squid Loligo pealei

Leonardo, Michael R., Moser, Duane P., Barbieri, Elena, Brantner, Christine A., MacGregor, Barbara J., Paster, Bruce J., Stackebrandt, Erko, Nealson, Kenneth H.

p. 1341 https://doi.org/10.1099/00207713-49-4-1341

Microbacterium kitamiense sp. nov., a new polysaccharide-producing bacterium isolated from the wastewater of a sugar-beet factory

Matsuyama, Hidetoshi, Kawasaki, Kosei, Yumoto, Isao, Shida, Osamu

p. 1353 https://doi.org/10.1099/00207713-49-4-1353

Sinorhizobium arboris sp. nov. and Sinorhizobium kostiense sp. nov., isolated from leguminous trees in Sudan and Kenya

Nick, Giselle, de Lajudie, Philippe, Eardly, Bertrand D., Suomalainen, Sini, Paulin, Lars, Zhang, Xiaoping, Gillis, Monique, Lindstrom, Kristina

p. 1359 https://doi.org/10.1099/00207713-49-4-1359

Amycolatopsis thermoflava sp. nov., a novel soil actinomycete from Hainan Island, China

Chun, Jongsik, Kim, Seung Bum, Oh, Youn Kyung, Seong, Chi-Nam, Lee, Dong-Hun, Bae, Kyung Sook, Lee, Kye-Joon, Kang, Sa-Ouk et al.

p. 1369 https://doi.org/10.1099/00207713-49-4-1369

Phylogenetic analysis of Fusobacterium alocis and Fusobacterium sulci based on 16S rRNA gene sequences: proposal of Filifactor alocis (Cato, Moore and Moore) comb. nov. and Eubacterium sulci (Cato, Moore and Moore) comb. nov.

Jalava, Jari, Eerola, Erkki

p. 1375 https://doi.org/10.1099/00207713-49-4-1375

Characterization of a novel Gram-positive, catalase-negative coccus from horses: description of Eremococcus coleocola gen. nov. sp. nov.

Collins, Matthew D., Jovita, Mar Rodriguez, Lawson, Paul A., Falsen, Enevold, Foster, Geoffrey

p. 1381 https://doi.org/10.1099/00207713-49-4-1381

A protein-based phylogenetic tree for Gram-positive bacteria derived from hrcA, a unique heat-shock regulatory gene

Ahmad, Suhail, Selvapandiyan, Angamuthu, Bhatnagar, Raj K.

p. 1387 https://doi.org/10.1099/00207713-49-4-1387

Streptomyces malaysiensis sp. nov., a new streptomycete species with rugose, ornamented spores

Al-Tai, Amira, Kim, Bongcheol, Kim, Seung Bum, Manfio, Gilson Paulo, Goodfellow, Michael

p. 1395 https://doi.org/10.1099/00207713-49-4-1395

Phylogenetic positions of Aeromonas encheleia, Aeromonas popoffii, Aeromonas DNA hybridization Group 11 and Aeromonas Group 501

Martinez-Murcia, Antonio J.

p. 1403 https://doi.org/10.1099/00207713-49-4-1403

Determination of members of a Borrelia afzelii-related group isolated from Ixodes nipponensis in Korea as Borrelia valaisiana

Masuzawa, Toshiyuki, Fukui, Takako, Miyake, Masaki, Oh, Hee-Bok, Cho, Min-Kee, Chang, Woo-Hyun, Imai, Yasuyuki, Yanagihara, Yasuyuke

p. 1409 https://doi.org/10.1099/00207713-49-4-1409

Comparison of partial malolactic enzyme gene sequences for phylogenetic analysis of some lactic acid bacteria species and relationships with the malic enzyme

Groisillier, A, Lonvaud-Funel, A

p. 1417

Helcococcus ovis sp. nov., a Gram-positive organism from sheep

Collins, M. D., Falsen, E., Foster, G., Monasterio, L. R., Dominguez, L., Fernandez-Garazabal, J. F.

p. 1429 https://doi.org/10.1099/00207713-49-4-1429

The phylogenetic position of Serratia, Buttiauxella and some other genera of the family Enterobacteriaceae -- Sproer et al. 49 (4): 1433 -- International Journal of Systematic and Evolutionary Microbiology

p. 1433

Dolosicoccus paucivorans gen. nov., sp. nov., isolated from human blood

Collins, MD, Rodriguez Jovita, M, Hutson, RA, Falsen, E, Sjoden, B, Facklam, RR

p. 1439

A study of small-colony, {beta}-haemolytic, Lancefield group C streptococci within the anginosus group: description of Streptococcus constellatus subsp. pharyngis subsp. nov., associated with the human throat and pharyngitis

Whiley, R. A., Hall, L. M. C., Hardie, J. M., Beighton, D.

p. 1443 https://doi.org/10.1099/00207713-49-4-1443

Lactobacillus paralimentarius sp. nov., isolated from sourdough

Cai, Yimin, Okada, Hisashi, Mori, Haruhiko, Benno, Yoshimi, Nakase, Takashi

p. 1451 https://doi.org/10.1099/00207713-49-4-1451

Characterization of bacteria isolated from wild legumes in the north-western regions of China

Tan, Zhi Yuan, Wang, En Tao, Peng, Gui Xiang, Zhu, Ming E., Martinez-Romero, Esperanza, Chen, Wen Xin

p. 1457 https://doi.org/10.1099/00207713-49-4-1457

International Journal of Systematic and Evolutionary Microbiology 49(4):1471.full.pdf

p. 1471.full.pdf

Thermoanaerobacter siderophilus sp. nov., a novel dissimilatory Fe(III)-reducing, anaerobic, thermophilic bacterium

Slobodkin, A. I., Tourova, T. P., Kuznetsov, B. B., Kostrikina, N. A., Chernyh, N. A., Bonch-Osmolovskaya, E. A.

p. 1471 https://doi.org/10.1099/00207713-49-4-1471

Rhizobium etli bv. mimosae, a novel biovar isolated from Mimosa affinis

Wang, En Tao, Rogel, M. Antonio, Garcia-de los Santos, Alejandro, Martinez-Romero, Julio, Cevallos, Miguel A., Martinez-Romero, Esperanza

p. 1479 https://doi.org/10.1099/00207713-49-4-1479

Mycobacterium wolinskyi sp. nov. and Mycobacterium goodii sp. nov., two new rapidly growing species related to Mycobacterium smegmatis and associated with human wound infections: a cooperative study from the International Working Group on Mycobacterial Taxonomy

Brown, Barbara A., Springer, Burkhard, Steingrube, Vincent A., Wilson, Rebecca W., Pfyffer, Gaby E., Garcia, Maria J., Menendez, M. Carmen, Rodriguez-Salgado, Beatriz et al.

p. 1493 https://doi.org/10.1099/00207713-49-4-1493

Gordonia alkanivorans sp. nov., isolated from tar-contaminated soil

Kummer, Christel, Schumann, Peter, Stackebrandt, Erko

p. 1513 https://doi.org/10.1099/00207713-49-4-1513

Characterization of a Gemella-like organism from the oral cavity of a dog: description of Gemella palaticanis sp. nov.

Collins, Matthew D., Rodriguez Jovita, Mar, Foster, Geoffrey, Sjoden, Berit, Falsen, Enevold

p. 1523 https://doi.org/10.1099/00207713-49-4-1523

Brevibacterium avium sp. nov., isolated from poultry

Pascual, C, Collins, MD

p. 1527

Identification of Enterobacteriaceae by partial sequencing of the gene encoding translation initiation factor 2

Hedegaard, Jakob, Steffensen, Soren A. de A., Norskov-Lauritsen, Niels, Mortensen, Kim K., Sperling-Petersen, Hans U.

p. 1531 https://doi.org/10.1099/00207713-49-4-1531

Clostridium frigidicarnis sp. nov., a psychrotolerant bacterium associated with 'blown pack' spoilage of vacuum-packed meats

Broda, D. M., Lawson, P. A., Bell, R. G., Musgrave, D. R.

p. 1539 https://doi.org/10.1099/00207713-49-4-1539

Phylogenetic analysis of genus Marinilabilia and related bacteria based on the amino acid sequences of GyrB and emended description of Marinilabilia salmonicolor with Marinilabilia agarovorans as its subjective synonym

Suzuki, Makoto, Nakagawa, Yasuyoshi, Harayama, Shigeaki, Yamamoto, Satoshi

p. 1551 https://doi.org/10.1099/00207713-49-4-1551

Pseudomonas gessardii sp. nov. and Pseudomonas migulae sp. nov., two new species isolated from natural mineral waters

Verhille, S, Baida, N, Dabboussi, F, Hamze, M, Izard, D, Leclerc, H

p. 1559

Characterization of a novel Atopobium isolate from the human vagina: description of Atopobium vaginae sp. nov

Rodriguez Jovita, M, Collins, MD, Sjoden, B, Falsen, E

p. 1573

Janthinobacterium agaricidamnosum sp. nov., a soft rot pathogen of Agaricus bisporus

Lincoln, Steven P., Fermor, Terence R., Tindall, B. J.

p. 1577 https://doi.org/10.1099/00207713-49-4-1577

Identification of clinically relevant viridans streptococci by analysis of transfer DNA intergenic spacer length polymorphism -- De Gheldre et al. 49 (4): 1591 -- International Journal of Systematic and Evolutionary Microbiology

p. 1591

Desulfonispora thiosulfatigenes gen. nov., sp. nov., a taurine-fermenting, thiosulfate-producing anaerobic bacterium

Denger, Karin, Stackebrandt, Erko, Cook, Alasdair M.

p. 1599 https://doi.org/10.1099/00207713-49-4-1599

The phytoplasma associated with ash yellows and lilac witches'-broom: 'Candidatus Phytoplasma fraxini'

Griffiths, Helen M., Sinclair, Wayne A., Smart, Christine D., Davis, Robert E.

p. 1605 https://doi.org/10.1099/00207713-49-4-1605

Geothrix fermentans gen. nov., sp. nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer

Coates, JD, Ellis, DJ, Gaw, CV, Lovley, DR

p. 1615

Taxonomic re-evaluation of 'Nocardiopsis' sp K-252T (= NRRL 15532T): a proposal to transfer this strain to the genus Nonomuraea as Nonomuraea longicatena sp. nov.

Chiba, Shigeru, Suzuki, Makoto, Ando, Katsuhiko

p. 1623 https://doi.org/10.1099/00207713-49-4-1623

Psychrophilic sulfate-reducing bacteria isolated from permanently cold Arctic marine sediments: description of Desulfofrigus oceanense gen. nov., sp. nov., Desulfofrigus fragile sp. nov., Desulfofaba gelida gen. nov., sp. nov., Desulfotalea psychrophila gen. nov., sp. nov. and Desulfotalea arctica sp. nov.

Knoblauch, Christian, Sahm, Kerstin, Jorgensen, Bo B.

p. 1631 https://doi.org/10.1099/00207713-49-4-1631

Polyphasic classification of the genus Photorhabdus and proposal of new taxa: P. luminescens subsp. luminescens subsp. nov., P. luminescens subsp. akhurstii subsp. nov., P. luminescens subsp. laumondii subsp. nov., P. temperata sp. nov., P. temperata subsp. temperata subsp. nov. and P. asymbiotica sp. nov.

Fischer-Le Saux, Marion, Viallard, Veronique, Brunel, Brigitte, Normand, Phillippe, Boemare, Noel E.

p. 1645 https://doi.org/10.1099/00207713-49-4-1645

Identification of Burkholderia species and genomovars from cystic fibrosis patients by AFLP fingerprinting

Coenye, Tom, Schouls, Leo M., Govan, John R. W., Kersters, Karel, Vandamme, Peter

p. 1657 https://doi.org/10.1099/00207713-49-4-1657

Friedmanniella spumicola sp. nov. and Friedmanniella capsulata sp. nov. from activated sludge foam: Gram-positive cocci that grow in aggregates of repeating groups of cocci

Maszenan, A. M., Seviour, R. J., Patel, B. K. C., Schumann, P., Burghardt, J., Webb, R. I., Soddell, J. A., Rees, G. N.

p. 1667 https://doi.org/10.1099/00207713-49-4-1667

Description of Gluconacetobacter sacchari sp. nov., a new species of acetic acid bacterium isolated from the leaf sheath of sugar cane and from the pink sugar-cane mealy bug

Franke, IH, Fegan, M, Hayward, C, Leonard, G, Stackebrandt, E, Sly, LI

p. 1681

Phylogenetic evidence for reclassification of Calymmatobacterium granulomatis as Klebsiella granulomatis comb. nov.

Carter, Jenny S., Bowden, Francis J., Bastian, Ivan, Myers, Garry M., Sriprakash, K. S., Kemp, David J.

p. 1695 https://doi.org/10.1099/00207713-49-4-1695

Detection of three different types of 'Tropheryma whippelii' directly from clinical specimens by sequencing, single-strand conformation polymorphism (SSCP) analysis and type-specific PCR of their 16S-23S ribosomal intergenic spacer region

Hinrikson, Hans Peter, Dutly, Fabrizio, Nair, Satheesh, Altwegg, Martin

p. 1701 https://doi.org/10.1099/00207713-49-4-1701

Phylogenetic characterization of 'Candidatus Helicobacter bovis', a new gastric helicobacter in cattle

De Groote, D, van Doorn, LJ, Ducatelle, R, Verschuuren, A, Tilmant, K, Quint, WGV, Haesebrouck, F, Vandamme, P

p. 1707

Ornithinicoccus hortensis gen. nov., sp. nov., a soil actinomycete which contains L-ornithine

Groth, Ingrid, Schumann, Peter, Martin, Karin, Schuetze, Barbara, Augsten, Kurt, Kramer, Ina, Stackebrandt, Erko

p. 1717 https://doi.org/10.1099/00207713-49-4-1717

Phylogenetic evidence for the transfer of Eubacterium lentum to the genus Eggerthella as Eggerthella lenta gen. nov., comb. nov

Kageyama, A, Benno, Y, Nakase, T

p. 1725

Beutenbergia cavernae gen. nov., sp. nov., an L-lysine-containing actinomycete isolated from a cave

Groth, Ingrid, Schumann, Peter, Schuetze, Barbara, Augsten, Kurt, Kramer, Ina, Stackebrandt, Erko

p. 1733 https://doi.org/10.1099/00207713-49-4-1733

Sporobacterium olearium gen. nov., sp. nov., a new methanethiol-producing bacterium that degrades aromatic compounds, isolated from an olive mill wastewater treatment digester

Mechichi, T, Labat, M, Garcia, JL, Thomas, P, Patel, BKC

p. 1741

Genomic diversity of the genus Stenotrophomonas -- Hauben et al. 49 (4): 1749 -- International Journal of Systematic and Evolutionary Microbiology

p. 1749

Microbispora corallina sp. nov., a new species of the genus Microbispora isolated from Thai soil

Nakajima, Y, Kitpreechavanich, V, Suzuki, K, Kudo, T

p. 1761

'Candidatus Helicobacter suis', a gastric helicobacter from pigs, and its phylogenetic relatedness to other gastrospirilla

De Groote, D, van Doorn, LJ, Ducatelle, R, Verschuuren, A, Haesebrouck, F, Quint, WGV, Jalava, K, Vandamme, P

p. 1769

Sporichthya brevicatena sp. nov.

Tamura, Tomohiko, Hayakawa, Masayuki, Hatano, Kazunori

p. 1779 https://doi.org/10.1099/00207713-49-4-1779

Gordonia polyisoprenivorans sp. nov., a rubber-degrading actinomycete isolated from an automobile tyre

Linos, Alexandros, Steinbuchel, Alexander, Sproer, Cathrin, Kroppenstedt, Reiner M.

p. 1785 https://doi.org/10.1099/00207713-49-4-1785

Successful in vitro cultivation of Borrelia duttonii and its comparison with Borrelia recurrentis

Cutler, SJ, Akintunde, COK, Moss, J, Fukunaga, M, Kurtenbach, K, Talbert, A, Zhang, H, Wright, DJM et al.

p. 1793

Description of Desulfotomaculum sp. Groll as Desulfotomaculum gibsoniae sp. nov

Kuever, J, Rainey, FA, Hippe, H

p. 1801

A novel species of thermoacidophilic archaeon, Sulfolobus yangmingensis sp. nov

Jan, RL, Wu, J, Chaw, SM, Tsai, CW, Tsen, SD

p. 1809

Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewatertreatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii sp. nov., Thiothrix fructosivorans sp. nov. and Thiothrix defluvii sp. nov.

Howarth, Richard, Unz, Richard F., Seviour, Elizabeth M., Seviour, Robert J., Blackall, Linda L., Pickup, Roger W., Jones, J. Gwyn, Yaguchi, Junichi et al.

p. 1817 https://doi.org/10.1099/00207713-49-4-1817