Issue table of contents

International Journal of Systematic and Evolutionary Microbiology — Volume 60, Issue 12

55 articles in this issue

NOTIFICATION LIST

Notification that new names and new combinations have appeared in volume 60, part 9, of the IJSEM

p. 2695–2696 https://doi.org/10.1099/ijs.0.029710-0

EVOLUTION, PHYLOGENY AND BIODIVERSITY

Differentiation of Bifidobacterium species using partial RNA polymerase β-subunit (rpoB) gene sequences

Byoung Jun Kim, Hee-Youn Kim, Yeo-Jun Yun, Bum-Joon Kim, Yoon-Hoh Kook

p. 2697–2704 https://doi.org/10.1099/ijs.0.020339-0

Bacteroidetes

Terrimonas aquatica sp. nov., isolated from a freshwater spring

Shih-Yi Sheu, Nian-Tsz Cho, A. B. Arun, Wen-Ming Chen

p. 2705–2709 https://doi.org/10.1099/ijs.0.020164-0

Proteobacteria

Limnohabitans planktonicus sp. nov. and Limnohabitans parvus sp. nov., planktonic betaproteobacteria isolated from a freshwater reservoir, and emended description of the genus Limnohabitans

Vojtěch Kasalický, Jan Jezbera, Karel Šimek, Martin W. Hahn

p. 2710–2714 https://doi.org/10.1099/ijs.0.018952-0

Proteobacteria

Acidovorax soli sp. nov., isolated from landfill soil

Jung-Hye Choi, Min-Soo Kim, Seong Woon Roh, Jin-Woo Bae

p. 2715–2718 https://doi.org/10.1099/ijs.0.019661-0

Proteobacteria

Pseudomonas taeanensis sp. nov., isolated from a crude oil-contaminated seashore

Dong-Heon Lee, Sung-Ran Moon, Young-Hyun Park, Jung-Ho Kim, Hoon Kim, Rebecca E. Parales, Hyung-Yeel Kahng

p. 2719–2723 https://doi.org/10.1099/ijs.0.018093-0

Proteobacteria

Sphingobium qiguonii sp. nov., a carbaryl-degrading bacterium isolated from a wastewater treatment system

Qiu-Xiang Yan, Yong-Xia Wang, Shun-Peng Li, Wen-Jun Li, Qing Hong

p. 2724–2728 https://doi.org/10.1099/ijs.0.020362-0

Other Bacteria

Rhodothermus profundi sp. nov., a thermophilic bacterium isolated from a deep-sea hydrothermal vent in the Pacific Ocean

Viggó Thór Marteinsson, Snaedis H. Bjornsdottir, Nadège Bienvenu, Jakob K. Kristjansson, Jean-Louis Birrien

p. 2729–2734 https://doi.org/10.1099/ijs.0.012724-0

Firmicutes And Related Organisms

Saccharofermentans acetigenes gen. nov., sp. nov., an anaerobic bacterium isolated from sludge treating brewery wastewater

Shuangya Chen, Lili Niu, Yongxiang Zhang

p. 2735–2738 https://doi.org/10.1099/ijs.0.017590-0

Firmicutes And Related Organisms

Staphylococcus devriesei sp. nov., isolated from teat apices and milk of dairy cows

Karlien Supré, Sarne De Vliegher, Ilse Cleenwerck, Katrien Engelbeen, Stefanie Van Trappen, Sofie Piepers, Otlis C. Sampimon, Ruth N. Zadoks et al.

p. 2739–2744 https://doi.org/10.1099/ijs.0.015982-0

Archaea

Archaeoglobus sulfaticallidus sp. nov., a thermophilic and facultatively lithoautotrophic sulfate-reducer isolated from black rust exposed to hot ridge flank crustal fluids

Bjørn O. Steinsbu, Ingunn H. Thorseth, Satoshi Nakagawa, Fumio Inagaki, Mark A. Lever, Bert Engelen, Lise Øvreås, Rolf B. Pedersen

p. 2745–2752 https://doi.org/10.1099/ijs.0.016105-0

Proteobacteria

Pseudomonas chlororaphis subsp. piscium subsp. nov., isolated from freshwater fish

Sarah E. Burr, Stefanie Gobeli, Peter Kuhnert, Elinor Goldschmidt-Clermont, Joachim Frey

p. 2753–2757 https://doi.org/10.1099/ijs.0.011692-0

Firmicutes And Related Organisms

Oceanobacillus locisalsi sp. nov., isolated from a marine solar saltern

Soo-Young Lee, Tae-Kwang Oh, Wonyong Kim, Jung-Hoon Yoon

p. 2758–2762 https://doi.org/10.1099/ijs.0.021907-0

Firmicutes And Related Organisms

Virgibacillus subterraneus sp. nov., a moderately halophilic Gram-positive bacterium isolated from subsurface saline soil

Xiaowei Wang, Yanfen Xue, Yanhe Ma

p. 2763–2767 https://doi.org/10.1099/ijs.0.019554-0

Proteobacteria

Halomonas titanicae sp. nov., a halophilic bacterium isolated from the RMS Titanic

Cristina Sánchez-Porro, Bhavleen Kaur, Henrietta Mann, Antonio Ventosa

p. 2768–2774 https://doi.org/10.1099/ijs.0.020628-0

Actinobacteria

Streptomyces tateyamensis sp. nov., Streptomyces marinus sp. nov. and Streptomyces haliclonae sp. nov., isolated from the marine sponge Haliclona sp.

Shams Tabrez Khan, Tomohiko Tamura, Motoki Takagi, Kazuo Shin-ya

p. 2775–2779 https://doi.org/10.1099/ijs.0.019869-0

Proteobacteria

Dongia mobilis gen. nov., sp. nov., a new member of the family Rhodospirillaceae isolated from a sequencing batch reactor for treatment of malachite green effluent

Ying Liu, Jing-Hua Jin, Ying-Hao Liu, Yu-Guang Zhou, Zhi-Pei Liu

p. 2780–2785 https://doi.org/10.1099/ijs.0.020347-0

Proteobacteria

Pantoea gaviniae sp. nov. and Pantoea calida sp. nov., isolated from infant formula and an infant formula production environment

Alexandra Popp, Ilse Cleenwerck, Carol Iversen, Paul De Vos, Roger Stephan

p. 2786–2792 https://doi.org/10.1099/ijs.0.019430-0

Actinobacteria

Aeromicrobium halocynthiae sp. nov., a taurocholic acid-producing bacterium isolated from the marine ascidian Halocynthia roretzi

Sung Hun Kim, Hyun Ok Yang, Young Chang Sohn, Hak Cheol Kwon

p. 2793–2798 https://doi.org/10.1099/ijs.0.016618-0

Bacteroidetes

Gramella marina sp. nov., isolated from the sea urchin Strongylocentrotus intermedius

Olga I. Nedashkovskaya, Seung Bum Kim, Kyung Sook Bae

p. 2799–2802 https://doi.org/10.1099/ijs.0.013870-0

Actinobacteria

Tomitella biformata gen. nov., sp. nov., a new member of the suborder Corynebacterineae isolated from a permafrost ice wedge

Taiki Katayama, Tomoko Kato, Michiko Tanaka, Thomas A. Douglas, Anatoli Brouchkov, Ayumi Abe, Teruo Sone, Masami Fukuda et al.

p. 2803–2807 https://doi.org/10.1099/ijs.0.017962-0

Actinobacteria

Microbacterium ginsengiterrae sp. nov., a β-glucosidase-producing bacterium isolated from soil of a ginseng field

Yeon-Ju Kim, Myung Kyum Kim, Thi Phuong Nam Bui, Ho-Bin Kim, Sathiyaraj Srinivasan, Deok-Chun Yang

p. 2808–2812 https://doi.org/10.1099/ijs.0.015784-0

Proteobacteria

Reinekea aestuarii sp. nov., isolated from tidal flat sediment

Ahyoung Choi, Jang-Cheon Cho

p. 2813–2817 https://doi.org/10.1099/ijs.0.018739-0

Actinobacteria

Pseudonocardia adelaidensis sp. nov., an endophytic actinobacterium isolated from the surface-sterilized stem of a grey box tree (Eucalyptus microcarpa)

Onuma Kaewkla, Christopher M. M. Franco

p. 2818–2822 https://doi.org/10.1099/ijs.0.019208-0

Actinobacteria

Bifidobacterium stercoris sp. nov., isolated from human faeces

Min-Soo Kim, Seong Woon Roh, Jin-Woo Bae

p. 2823–2827 https://doi.org/10.1099/ijs.0.019943-0

Archaea

Halostagnicola kamekurae sp. nov., an extremely halophilic archaeon from solar salt

Shuhei Nagaoka, Hiroaki Minegishi, Akinobu Echigo, Ron Usami

p. 2828–2831 https://doi.org/10.1099/ijs.0.014449-0

Proteobacteria

Azospirillum thiophilum sp. nov., a diazotrophic bacterium isolated from a sulfide spring

Ksenia Lavrinenko, Elena Chernousova, Elena Gridneva, Galina Dubinina, Vladimir Akimov, Jan Kuever, Anatoly Lysenko, Margarita Grabovich

p. 2832–2837 https://doi.org/10.1099/ijs.0.018853-0

Actinobacteria

Leucobacter aerolatus sp. nov., from the air of a duck barn

E. Martin, N. Lodders, U. Jäckel, P. Schumann, P. Kämpfer

p. 2838–2842 https://doi.org/10.1099/ijs.0.021303-0

Proteobacteria

Photobacterium jeanii sp. nov., isolated from corals and zoanthids

Luciane A. Chimetto, Ilse Cleenwerck, Cristiane C. Thompson, Marcelo Brocchi, Anne Willems, Paul De Vos, Fabiano L. Thompson

p. 2843–2848 https://doi.org/10.1099/ijs.0.019968-0

Bacteroidetes

Mucilaginibacter frigoritolerans sp. nov., Mucilaginibacter lappiensis sp. nov. and Mucilaginibacter mallensis sp. nov., isolated from soil and lichen samples

Minna K. Männistö, Marja Tiirola, Jennifer McConnell, Max M. Häggblom

p. 2849–2856 https://doi.org/10.1099/ijs.0.019364-0

Proteobacteria

Stakelama pacifica gen. nov., sp. nov., a new member of the family Sphingomonadaceae isolated from the Pacific Ocean

Chuang Chen, Qiang Zheng, Ya-Nan Wang, Xiao-Jun Yan, Li-Kai Hao, Xun Du, Nianzhi Jiao

p. 2857–2861 https://doi.org/10.1099/ijs.0.018945-0

Proteobacteria

Sulfuricella denitrificans gen. nov., sp. nov., a sulfur-oxidizing autotroph isolated from a freshwater lake

Hisaya Kojima, Manabu Fukui

p. 2862–2866 https://doi.org/10.1099/ijs.0.016980-0

Bacteroidetes

Pontibacter niistensis sp. nov., isolated from forest soil

Syed G. Dastager, Q. S. Raziuddin, C. K. Deepa, Wen-Jun Li, Ashok Pandey

p. 2867–2870 https://doi.org/10.1099/ijs.0.019935-0

Bacteroidetes

Euzebyella saccharophila gen. nov., sp. nov., a marine bacterium of the family Flavobacteriaceae

Teresa Lucena, Javier Pascual, Assunta Giordano, Agata Gambacorta, Esperanza Garay, David R. Arahal, M. Carmen Macián, María J. Pujalte

p. 2871–2876 https://doi.org/10.1099/ijs.0.020875-0

Proteobacteria

Hwanghaeicola aestuarii gen. nov., sp. nov., a moderately halophilic bacterium isolated from a tidal flat of the Yellow Sea

Jeong Myeong Kim, Ji Young Jung, Ho Byoung Chae, Woojun Park, Che Ok Jeon

p. 2877–2881 https://doi.org/10.1099/ijs.0.021048-0

Bacteroidetes

Flavobacterium haoranii sp. nov., a cypermethrin-degrading bacterium isolated from a wastewater treatment system

Jun Zhang, Rui-Bo Jiang, Xiao-Xia Zhang, Bao-Jian Hang, Jian He, Shun-Peng Li

p. 2882–2886 https://doi.org/10.1099/ijs.0.020776-0

EVOLUTION, PHYLOGENY AND BIODIVERSITY

Phylogenetic analysis and delineation of phytoplasmas based on secY gene sequences

I.-M. Lee, K. D. Bottner-Parker, Y. Zhao, R. E. Davis, N. A. Harrison

p. 2887–2897 https://doi.org/10.1099/ijs.0.019695-0

Firmicutes And Related Organisms

Alkaliphilus halophilus sp. nov., a strictly anaerobic and halophilic bacterium isolated from a saline lake, and emended description of the genus Alkaliphilus

Xiao-Yue Wu, Kong-Lan Shi, Xue-Wei Xu, Min Wu, Aharon Oren, Xu-Fen Zhu

p. 2898–2902 https://doi.org/10.1099/ijs.0.014084-0

Firmicutes And Related Organisms

Lactobacillus odoratitofui sp. nov., isolated from stinky tofu brine

Shiou-Huei Chao, Masae Sasamoto, Yuko Kudo, Junji Fujimoto, Ying-Chieh Tsai, Koichi Watanabe

p. 2903–2907 https://doi.org/10.1099/ijs.0.019307-0

Proteobacteria

Paracoccus fistulariae sp. nov., a lipolytic bacterium isolated from bluespotted cornetfish, Fistularia commersonii

Young-Ok Kim, Hee Jeong Kong, Sooyeon Park, So-Jung Kang, Kyung-Kil Kim, Dae Yeon Moon, Tae-Kwang Oh, Jung-Hoon Yoon

p. 2908–2912 https://doi.org/10.1099/ijs.0.021808-0

Firmicutes And Related Organisms

Cohnella xylanilytica sp. nov. and Cohnella terrae sp. nov., xylanolytic bacteria from soil

Saowapar Khianngam, Somboon Tanasupawat, Ancharida Akaracharanya, Kwang Kyu Kim, Keun Chul Lee, Jung-Sook Lee

p. 2913–2917 https://doi.org/10.1099/ijs.0.017855-0

Archaea

Methanocella arvoryzae sp. nov., a hydrogenotrophic methanogen isolated from rice field soil

Sanae Sakai, Ralf Conrad, Werner Liesack, Hiroyuki Imachi

p. 2918–2923 https://doi.org/10.1099/ijs.0.020883-0

Firmicutes And Related Organisms

Bacillus oceanisediminis sp. nov., isolated from marine sediment

Jianli Zhang, Jiewei Wang, Caiyuan Fang, Fei Song, Yuhua Xin, Lei Qu, Kai Ding

p. 2924–2929 https://doi.org/10.1099/ijs.0.019851-0

Firmicutes And Related Organisms

Ornithinibacillus contaminans sp. nov., an endospore-forming species

P. Kämpfer, E. Falsen, N. Lodders, S. Langer, H.-J. Busse, P. Schumann

p. 2930–2934 https://doi.org/10.1099/ijs.0.021337-0

Proteobacteria

Rhodanobacter soli sp. nov., isolated from soil of a ginseng field

Thi Phuong Nam Bui, Yeon-Ju Kim, Hobin Kim, Deok-Chun Yang

p. 2935–2939 https://doi.org/10.1099/ijs.0.019422-0

Firmicutes And Related Organisms

Terribacillus aidingensis sp. nov., a moderately halophilic bacterium

Wenyan Liu, Linlin Jiang, Chunjing Guo, Su Sheng Yang

p. 2940–2945 https://doi.org/10.1099/ijs.0.017228-0

Proteobacteria

Limnohabitans australis sp. nov., isolated from a freshwater pond, and emended description of the genus Limnohabitans

Martin W. Hahn, Vojtěch Kasalický, Jan Jezbera, Ulrike Brandt, Karel Šimek

p. 2946–2950 https://doi.org/10.1099/ijs.0.022384-0

Other Bacteria

Granulicella paludicola gen. nov., sp. nov., Granulicella pectinivorans sp. nov., Granulicella aggregans sp. nov. and Granulicella rosea sp. nov., acidophilic, polymer-degrading acidobacteria from Sphagnum peat bogs

Timofey A. Pankratov, Svetlana N. Dedysh

p. 2951–2959 https://doi.org/10.1099/ijs.0.021824-0

Proteobacteria

Reclassification of the polyphyletic genus Prosthecomicrobium to form two novel genera, Vasilyevaea gen. nov. and Bauldia gen. nov. with four new combinations: Vasilyevaea enhydra comb. nov., Vasilyevaea mishustinii comb. nov., Bauldia consociata comb. nov. and Bauldia litoralis comb. nov.

Benjamin Yee, Gary E. Oertli, John A. Fuerst, James T. Staley

p. 2960–2966 https://doi.org/10.1099/ijs.0.018234-0

Actinobacteria

Nocardiopsis nikkonensis sp. nov., isolated from a compost sample

Hideki Yamamura, Shin-ya Ohkubo, Yuumi Ishida, Misa Otoguro, Tomohiko Tamura, Masayuki Hayakawa

p. 2967–2971 https://doi.org/10.1099/ijs.0.016956-0

Bacteroidetes

Ekhidna lutea gen. nov., sp. nov., a member of the phylum Bacteroidetes isolated from the South East Pacific Ocean

Karine Alain, Brian J. Tindall, Philippe Catala, Laurent Intertaglia, Philippe Lebaron

p. 2972–2978 https://doi.org/10.1099/ijs.0.018804-0

Bacteroidetes

Arcicella aurantiaca sp. nov., isolated from stream water

Shih-Yi Sheu, Cho-Song Yang, Ming-Hui Chen, A. B. Arun, Chiu-Chung Young, Wen-Ming Chen

p. 2979–2983 https://doi.org/10.1099/ijs.0.021527-0

EVOLUTION, PHYLOGENY AND BIODIVERSITY

hsp60 and 16S rRNA gene sequence relationships among species of the genus Bacteroides with the finding that Bacteroides suis and Bacteroides tectus are heterotypic synonyms of Bacteroides pyogenes

Mitsuo Sakamoto, Natsuko Suzuki, Yoshimi Benno

p. 2984–2990 https://doi.org/10.1099/ijs.0.021154-0

Actinobacteria

Brevibacterium salitolerans sp. nov., an actinobacterium isolated from salt-lake sediment

Tong-Wei Guan, Ke Zhao, Jing Xiao, Ying Liu, Zhan-Feng Xia, Xiao-Ping Zhang, Li-Li Zhang

p. 2991–2995 https://doi.org/10.1099/ijs.0.020214-0

Bacteroidetes

Litoribacter ruber gen. nov., sp. nov., an alkaliphilic, halotolerant bacterium isolated from a soda lake sediment

Shi-Ping Tian, Yong-Xia Wang, Bin Hu, Xiao-Xia Zhang, Wei Xiao, Yun Chen, Yong-Hong Lai, Meng-Liang Wen et al.

p. 2996–3001 https://doi.org/10.1099/ijs.0.021626-0