Research Article

Structure and Variability of the a Sequence in the Genome of Human Cytomegalovirus (Towne Strain)

Journal of General Virology 1987; 68(8):2223 · https://doi.org/10.1099/0022-1317-68-8-2223

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Abstract

We have defined the boundaries of the a sequence from human cytomegalovirus (CMV) strain Towne, characterized internal variability and determined the position of the cleavage site used to generate genomic termini. The cleavage site is positioned a fixed distance from two stretches of sequence homology that have been observed near the ends of many herpesvirus genomes. Unlike a comparable region in CMV (AD169), the CMV (Towne) a sequence has a relatively low level of variability within the a sequence and its structure is stable through repeated virus passage.