Other Bacteria

Planifilum composti sp. nov., a thermophile isolated from compost

  • 1Department of Microbial & Nano Materials, College of Science & Technology, Mokwon University, Doan-dong 800, Seo-gu, Daejeon 302-729, Republic of Korea
  • 2Institute of Microbial Ecology and Resources, Mokwon University, Doan-dong 800, Seo-gu, Daejeon 302-729, Republic of Korea
  • Correspondence
    Kyung-Sook Whang kswhang{at}mokwon.ac.kr
  • International Journal of Systematic and Evolutionary Microbiology 2013; 63(Pt 12):4557–4561 · https://doi.org/10.1099/ijs.0.053199-0

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    Abstract

    Two thermophilic bacteria, designated strains P8T and P12, were isolated from compost in Korea. The isolates grew aerobically from 50 to 75 °C (optimum at 55 °C) and at pH 4.0–9.0 (optimum pH 6.5). Aerial mycelia were not observed. Single spores were produced along the substrate hypha. The predominant menaquinone was MK-7. Major fatty acids were iso-C17 : 0, iso-C15 : 0 and iso-C16 : 0. The cell wall contained meso-diaminopimelic acid and the polar lipids were phosphatidylethanolamine, an aminophospholipid and sphingoglycolipid. The DNA G+C contents were 55.9–56.5 mol%. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strains P8T and P12 belonged to the genus Planifilum in the family Thermoactinomycetaceae with sequence similarities of 96.1–97.2 %. Levels of DNA–DNA relatedness between strain P8T and the type strains of recognized species of the genus Planifilum ranged from 28.9 to 38.2 %. On the basis of data from the present polyphasic study, strains P8T and P12 are considered to represent a novel species of the genus Planifilum, for which the name Planifilum composti sp. nov. is proposed. The type strain is P8T ( = KACC 16581T = NBRC 108858T).

    • The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA gene sequence of strains P8T and P12 are JN793954 and JN793955, respectively.

    • One supplementary table and four supplementary figures are available with the online version of this paper.