Proteobacteria

Thalassospira povalilytica sp. nov., a polyvinyl-alcohol-degrading marine bacterium

  • 1Extremobiosphere Research Program, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka 237-0061, Japan
  • 2International Graduate School of Arts and Sciences, Yokohama City University, 22-2 Seto, Kanazawa-ku, Yokohama 236-0027, Japan
  • Correspondence
    Yuichi Nogi nogiy{at}jamstec.go.jp
  • International Journal of Systematic and Evolutionary Microbiology 2014; 64(Pt 4):1149–1153 · https://doi.org/10.1099/ijs.0.058321-0

    View at publisher PubMed

    Abstract

    A polyvinyl-alcohol-degrading marine bacterium was isolated from plastic rope litter found in Tokyo Bay, Japan. The isolated strain, Zumi 95T, was a Gram-reaction-negative, non-spore-forming and facultatively anaerobic chemo-organotroph. The major respiratory quinone was Q-10. The predominant fatty acids were C18 : 1ω7c and C16 : 0. On the basis of 16S rRNA gene sequence analysis, the isolated strain was closely affiliated with members of the genus Thalassospira in the class Alphaproteobacteria. The DNA G+C content of the novel strain was 55.1 mol%. The hybridization values for DNA–DNA relatedness between this strain and four reference strains representing species of the genus Thalassospira were significantly lower than that accepted as the phylogenetic definition of a species. On the basis of differences in taxonomic characteristics, the isolated strain represents a novel species of the genus Thalassospira for which the name Thalassospira povalilytica sp. nov. (type strain Zumi 95T = JCM 18746T = DSM 26719T) is proposed.

    • The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain Zumi 95T is AB548215.

    • Three supplementary tables are available with the online version of this paper.

    Abbreviations:
    ASW
    artificial seawater
    ML
    maximum-likelihood
    MP
    maximum-parsimony
    NJ
    neighbour-joining
    PAH
    polycyclic aromatic hydrocarbon
    PVA
    polyvinyl alcohol