Actinobacteria

Enteractinococcus coprophilus gen. nov., sp. nov., of the family Micrococcaceae, isolated from Panthera tigris amoyensis faeces, and transfer of Yaniella fodinae Dhanjal et al. 2011 to the genus Enteractinococcus as Enteractinococcus fodinae comb. nov.

  • 1College of Resources and Environment, Northwest A & F University, 712100 Yangling, Shaanxi, PR China
  • 2Yunnan Institute of Microbiology, Yunnan University, 650091 Kunming, PR China
  • 3Laboratory of Metabolic Disease Research and Drug Development, China Medical University, 110001 Shenyang, PR China
  • 4Yunnan Wild Animal Park, 650218 Kunming, PR China
  • Correspondence
    Yi Jiang jiangyikm{at}hotmail.com Wen-Xiang He wxhe1968{at}163.com
  • International Journal of Systematic and Evolutionary Microbiology 2012; 62(Pt 11):2710–2716 · https://doi.org/10.1099/ijs.0.034249-0

    View at publisher PubMed

    Abstract

    A novel actinobacterium, designated strain YIM 100590T, was isolated from Panthera tigris amoyensis faeces collected from Yunnan Wild Animal Park in Yunnan province, south-west China. Phylogenetic analysis based on 16S rRNA gene sequence data showed that strain YIM 100590T is a member of the family Micrococcaceae. Cells were coccoid to oval (0.7–1.5 µm in diameter) occurring singly or in clusters. Growth was observed at 10–37 °C (optimum 28 °C) and at pH 7.0–11.0 (optimum pH 8.0). The major fatty acids were iso-C15 : 0 (32.22 %), anteiso-C15 : 0 (31.64 %) and iso-C16 : 0 (17.38 %). The peptidoglycan was of A4α type (l-Lys–Gly–l-Glu). The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, phosphatidylinositol mannosides, dimannosyl diacylglycerol, an unknown glycolipid and two unknown phospholipids. The quinone system comprised menaquinones MK-7 (91.9 %) and MK-8 (8.3 %). The DNA G+C content of strain YIM 100590T was 56.2 mol%. Chemotaxonomic data indicated that the strain belongs to the family Micrococcaceae. On the basis of morphological and chemotaxonomic data and phylogenetic analysis, strain YIM 100590T is considered to represent a novel species of a new genus within the family Micrococcaceae, for which the name Enteractinococcus coprophilus gen. nov., sp. nov. is proposed. The type strain of Enteractinococcus coprophilus is YIM 100590T ( = DSM 24083T = JCM 17352T). Yaniella fodinae DSM 22966T was transferred to the new genus as Enteractinococcus fodinae comb. nov. (type strain G5T = DSM 22966T = JCM 17931T = MTCC 9846T).

    • These authors contributed equally to this work.

    • The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain YIM 100590T is JF507603.

    • A supplementary table and a supplementary figure are available with the online version of this paper.

    Abbreviations:
    DMDG
    dimannosyl diacylglycerol
    DPG
    diphosphatidylglycerol
    PG
    phosphatidylglycerol
    PI
    phosphatidylinositol
    PIM
    phosphatidylinositol mannosides
    GL
    unknown glycolipid
    PLs
    unknown phospholipids