Proteobacteria

Algiphilus aromaticivorans gen. nov., sp. nov., an aromatic hydrocarbon-degrading bacterium isolated from a culture of the marine dinoflagellate Lingulodinium polyedrum, and proposal of Algiphilaceae fam. nov.

  • 1Department of Environmental Sciences and Engineering, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, NC 27599-7431, USA
  • 2Lancaster University, Lancaster Environment Centre, Lancaster LA1 4YQ, UK
  • 3School of Life Sciences, Heriot-Watt University, Edinburgh EH14 4AS, UK
  • 4Scottish Association for Marine Science, Dunstaffnage Marine Laboratory, Oban, Argyll PA37 1QA, UK
  • 5Department of Microbiology, University of Georgia, Athens, GA 30602, USA
  • 6CSIRO Marine and Atmospheric Research, CSIRO Wealth from Oceans Flagship, GPO Box 1538, Hobart, Tasmania 7000, Australia
  • Correspondence
    Tony Gutierrez Tony.Gutierrez{at}hw.ac.uk
  • International Journal of Systematic and Evolutionary Microbiology 2012; 62(Pt 11):2743–2749 · https://doi.org/10.1099/ijs.0.033324-0

    View at publisher PubMed

    Abstract

    A strictly aerobic, halotolerant, Gram-stain-negative, rod-shaped bacterium, designated strain DG1253T, was isolated from a laboratory culture of the marine dinoflagellate Lingulodinium polyedrum (CCAP 1121/2). The strain was able to degrade two- and three-ring polycyclic aromatic hydrocarbons. It exhibited a narrow nutritional spectrum, preferring to utilize aliphatic and aromatic hydrocarbon compounds and small organic acids. Cells produced surface blebs and contained a single polar flagellum. The predominant isoprenoid quinone of strain DG1253T was Q-8. The fatty acid profile was dominated by C18 : 1ω7c. The mean DNA G+C content of strain DG1253T was 63.6±0.25 mol%. 16S rRNA gene sequence analysis placed this organism within the order Xanthomonadales of the class Gammaproteobacteria. Its closest relatives included representatives of the HydrocarboniphagaNevskiaSinobacter clade (≤89.9 % 16S rRNA gene sequence similarity) in the family Sinobacteraceae. On the basis of distinct phenotypic and genotypic characteristics, strain DG1253T is considered to represent a novel species of a new genus in the class Gammaproteobacteria, for which the name Algiphilus aromaticivorans gen. nov., sp. nov. is proposed. The type strain of the type species, Algiphilus aromaticivorans, is DG1253T ( = ATCC BAA-2243T = DSM 24793T). In addition, a new family, Algiphilaceae fam. nov., is proposed to accommodate the genus Algiphilus.

    • The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain DG1253T is DQ486493.

    Abbreviations:
    PAHs
    polycyclic aromatic hydrocarbons
    PHB
    poly-β-hydroxybutyrate