Bacteroidetes

Flaviramulus ichthyoenteri sp. nov., an N-acylhomoserine lactone-degrading bacterium isolated from the intestine of a flounder (Paralichthys olivaceus), and emended descriptions of the genus Flaviramulus and Flaviramulus basaltis

  • College of Marine Life Sciences, Ocean University of China, Qingdao 266003, PR China
  • Correspondence
    Xiao-Hua Zhang xhzhang{at}ouc.edu.cn
  • International Journal of Systematic and Evolutionary Microbiology 2013; 63(Pt 12):4477–4483 · https://doi.org/10.1099/ijs.0.053744-0

    View at publisher PubMed

    Abstract

    A Gram-stain-negative, strictly aerobic, yellow-pigmented, rod-shaped and N-acylhomoserine lactone-degrading bacterium, designated strain Th78T, was isolated from the intestine of a cultured flounder (Paralichthys olivaceus). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain Th78T belonged to the genus Flaviramulus (family Flavobacteriaceae) and showed the highest 16S rRNA gene sequence similarity to Flaviramulus basaltis H35T (96.70 %). Optimal growth occurred in the presence of 2–3 % (w/v) NaCl, at pH 7.0–8.0 and at 28 °C. The major fatty acids were iso-C15 : 0 3-OH, iso-C15 : 1 G and iso-C17 : 0 3-OH. The major polar lipids were phosphatidylethanolamine, one unidentified aminolipid and three unidentified polar lipids. Menaquinone 6 (MK-6) was the only respiratory quinone. The DNA G+C content of strain Th78T was 31.5 mol%. On the basis of polyphasic analysis, strain Th78T is considered to represent a novel species of the genus Flaviramulus, for which the name Flaviramulus ichthyoenteri sp. nov. is proposed. The type strain is Th78T ( = JCM 18634T = KCTC 32142T = DSM 26285T). Emended descriptions of the genus Flaviramulus and Flaviramulus basaltis are also proposed.

    • The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain Th78T is JX412958.

    • A supplementary figure is available with the online version of this paper.

    Abbreviations:
    AHL
    N-acylhomoserine lactone
    AL
    aminolipid
    C6-HSL
    N-decanoyl-l-homoserine
    QS
    quorum sensing
    PE
    phosphatidylethanolamine