Firmicutes And Related Organisms

Paenibacillus darwinianus sp. nov., isolated from gamma-irradiated Antarctic soil

  • 1Centre for Microbial Innovation, School of Biological Sciences, University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
  • 2Callaghan Innovation Limited, PO Box 31310, Lower Hutt 5040, New Zealand
  • 3School of Chemical Sciences, University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
  • 4BioDiscovery New Zealand Limited, Parnell, Auckland, New Zealand
  • 5Landcare Research, Private Bag 3127, Hamilton, New Zealand
  • Correspondence
    Melissa Dsouza melissa33in{at}gmail.com
  • International Journal of Systematic and Evolutionary Microbiology 2014; 64(Pt 4):1406–1411 · https://doi.org/10.1099/ijs.0.056697-0

    View at publisher PubMed

    Abstract

    A novel bacterium, strain BrT, was isolated from gamma-irradiated soils of the Britannia drift, Lake Wellman Region, Antarctica. This isolate was rod-shaped, endospore forming, Gram-stain-variable, catalase-positive, oxidase-negative and strictly aerobic. Cells possessed a monotrichous flagellum. Optimal growth was observed at 18 °C, pH 7.0 in PYGV or R2A broth. The major cellular fatty acid was anteiso-C15 : 0 (63.4 %). Primary identified lipids included phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. Total phospholipid was 60 % (w/w) of the total lipid extract. MK-7 was the dominant isoprenoid quinone. The genomic DNA G+C content was 55.6 mol%. Based on 16S rRNA gene sequence similarity, strain BrT clusters within the genus Paenibacillus with similarity values ranging from 93.9 to 95.1 %. Phylogenetic analyses by maximum-likelihood, maximum-parsimony and neighbour-joining methods revealed that strain BrT clusters with Paenibacillus daejeonensis (AF290916), Paenibacillus tarimensis (EF125184) and Paenibacillus pinihumi (GQ423057), albeit with weak bootstrap support. On the basis of phenotypic, chemotaxonomic and phylogenetic characteristics, we propose that strain BrT represents a novel species, Paenibacillus darwinianus sp. nov. The type strain is BrT ( = DSM 27245T = ICMP 19912T).

    • The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA and rpoB gene sequences of Paenibacillus darwinianus BrT are KF264455 and KF819812, respectively.

    • Four supplementary figures are available with the online version of this paper.