Microbial genomics research — Page 3

Research using genome sequencing, comparative genomics, metagenomics and genomic epidemiology to understand microbial biology and evolution.

Articles — page 3

Showing records 121–180 of 263, ordered using archive prominence and publication metadata.

Utilization of geraniol is dependent on molybdenum in Pseudomonas aeruginosa: evidence for different metabolic routes for oxidation of geraniol and citronellol

Hoschle, Birgit, Jendrossek, Dieter

Microbiology2005

Multiple genotypes of Chlamydia pneumoniae identified in human carotid plaque

Cochrane, Melanie, Walker, Philip, Gibbs, Harry, Timms, Peter

Microbiology2005

Acd, a peptidoglycan hydrolase of Clostridium difficile with N-acetylglucosaminidase activity

Anne Dhalluin, Ingrid Bourgeois, Martine Pestel-Caron, Emilie Camiade, Gregory Raux, Pascal Courtin, et al.

Microbiology2005

Genome sequence of Chrysodeixis chalcites nucleopolyhedrovirus, a baculovirus with two DNA photolyase genes

van Oers, Monique M., Abma-Henkens, Marleen H. C., Herniou, Elisabeth A., de Groot, Joost C. W., Peters, Sander, Vlak, Just M.

Journal of General Virology2005

Bacterial whole-genome sequences: minimal information and strain availability

Coenye, Tom, Vandamme, Peter

Microbiology2004

Genetic clues on the evolution of anaerobic catabolism of aromatic compounds

Barragan, Maria Jose Lopez, Diaz, Eduardo, Garcia, Jose Luis, Carmona, Manuel

Microbiology2004

The complex structure of polyhydroxybutyrate (PHB) granules: four orthologous and paralogous phasins occur in Ralstonia eutropha

Potter, Markus, Muller, Helena, Reinecke, Frank, Wieczorek, Roman, Fricke, Florian, Bowien, Botho, et al.

Microbiology2004

Positive effects of multiple pch genes on expression of the locus of enterocyte effacement genes and adherence of enterohaemorrhagic Escherichia coli O157 : H7 to HEp-2 cells

Iyoda, Sunao, Watanabe, Haruo

Microbiology2004

Complete nucleotide sequence and genome organization of Grapevine leafroll-associated virus 3, type member of the genus Ampelovirus

Ling, Kai-Shu, Zhu, Hai-Ying, Gonsalves, Dennis

Journal of General Virology2004

Genetic dissection of trehalose biosynthesis in Corynebacterium glutamicum: inactivation of trehalose production leads to impaired growth and an altered cell wall lipid composition

Tzvetkov, Mladen, Klopprogge, Corinna, Zelder, Oskar, Liebl, Wolfgang

Microbiology2003

Comparative analysis of the genomes of Rachiplusia ou and Autographa californica multiple nucleopolyhedroviruses

Harrison, Robert L., Bonning, Bryony C.

Journal of General Virology2003

Germination of Bacillus cereus spores in response to L-alanine and to inosine: the roles of gerL and gerQ operons

Barlass, Paul J., Houston, Christopher W., Clements, Mark O., Moir, Anne

Microbiology2002

Extracytoplasmic proteins of Mycobacterium tuberculosis - mature secreted proteins often start with aspartic acid and proline

Wiker, Harald G., Wilson, Mike A., Schoolnik, Gary K.

Microbiology2000

The essential two-component regulatory system encoded by yycF and yycG modulates expression of the ftsAZ operon in Bacillus subtilis

Fukuchi, Keisuke, Kasahara, Yasuhiro, Asai, Kei, Kobayashi, Kazuo, Moriya, Shigeki, Ogasawara, Naotake

Microbiology2000

Inactivation of the LysR regulator Cj1000 of Campylobacter jejuni affects host colonization and respiration

Virginie Dufour, Jennifer Li, Annika Flint, Eric Rosenfeld, Katell Rivoal, Sylvie Georgeault, et al.

Microbiology2013

How RNA viruses maintain their genome integrity

John N. Barr, Rachel Fearns

Journal of General Virology2010

Analysis of CRISPR in Streptococcus mutans suggests frequent occurrence of acquired immunity against infection by M102-like bacteriophages

van der Ploeg, Jan R.

Microbiology2009

Analysis of the complete genome sequence of epidemic keratoconjunctivitis-related human adenovirus type 8, 19, 37 and a novel serotype

Kaneko, Hisatoshi, Iida, Tomohiro, Ishiko, Hiroaki, Ohguchi, Takeshi, Ariga, Toshihide, Tagawa, Yoshitsugu, et al.

Journal of General Virology2009

TccP2-mediated subversion of actin dynamics by EPEC 2 - a distinct evolutionary lineage of enteropathogenic Escherichia coli

Whale, Andrew D., Hernandes, Rodrigo T., Ooka, Tadasuke, Beutin, Lothar, Schuller, Stephanie, Garmendia, Junkal, et al.

Microbiology2007

Use of suppression subtractive hybridization to examine the accessory genome of the Liverpool cystic fibrosis epidemic strain of Pseudomonas aeruginosa

Smart, Catherine H. M., Walshaw, Martin J., Hart, C. Anthony, Winstanley, Craig

Journal of Medical Microbiology2006

Transcriptomic and proteomic analyses of the pMOL30-encoded copper resistance in Cupriavidus metallidurans strain CH34

Monchy, Sebastien, Benotmane, Mohammed A., Wattiez, Ruddy, van Aelst, Sebastien, Auquier, Vanessa, Borremans, Brigitte, et al.

Microbiology2006

Dispensable genes and foreign DNA in Streptococcus mutans

Waterhouse, Janet C., Russell, Roy R. B.

Microbiology2006

Characterization of a new densovirus infecting the German cockroach, Blattella germanica

Mukha, D. V., Chumachenko, A. G., Dykstra, M. J., Kurtti, T. J., Schal, C.

Journal of General Virology2006

A new subtype of hepatitis C virus genotype 1: complete genome and phylogenetic relationships of an Equatorial Guinea isolate

Bracho, Maria Alma, Carrillo-Cruz, Francy Yolima, Ortega, Enrique, Moya, Andres, Gonzalez-Candelas, Fernando

Journal of General Virology2006

Complete genome sequence of simian adenovirus 1: an Old World monkey adenovirus with two fiber genes

Kovacs, Gabor M., Harrach, Balazs, Zakhartchouk, Alexander N., Davison, Andrew J.

Journal of General Virology2005

A novel glucan-binding protein with lipase activity from the oral pathogen Streptococcus mutans

Shah, Deepan S. H., Russell, Roy R. B.

Microbiology2004

Genetic variability in hepatitis B viruses

Karin Kidd-Ljunggren, Yuzo Miyakawa, Alistair H. Kidd

Journal of General Virology2002

Partial characterization of a novel gammaherpesvirus isolated from a European badger (Meles meles)

Banks, Malcolm, King, Donald P., Daniells, Clare, Stagg, David A., Gavier-Widen, Dolores

Journal of General Virology2002

An NMR and enzyme study of the carbon metabolism of Neisseria meningitidis

Leighton, Matthew P., Kelly, David J., Williamson, Michael P., Shaw, Jonathan G.

Microbiology2001

Identification of a novel gene, fimV, involved in twitching motility in Pseudomonas aeruginosa

Semmler, Annalese B. T., Whitchurch, Cynthia B., Leech, Andrew J., Mattick, John S.

Microbiology2000

Characterization and genomic analysis of tobacco vein clearing virus, a plant pararetrovirus that is transmitted vertically and related to sequences integrated in the host genome

Lockhart, B. E., Menke, J., Dahal, G., Olszewski, N. E.

Journal of General Virology2000

A novel tRNA-associated locus (trl) from Helicobacter pylori is co-transcribed with tRNA(Gly) and reveals genetic diversity

Dundon, WG, Marshall, DG, O Morain, CA, Smyth, CJ

Microbiology1999

Taxonomic characteristics of fijiviruses based on nucleotide sequences of the oat sterile dwarf virus genome

Isogai, M, Uyeda, I, Lindsten, K

Journal of General Virology1998

Complete nucleotide sequence of tobacco necrosis virus strain DH and genes required for RNA replication and virus movement

Molnar, A, Havelda, Z, Dalmay, T, Szutorisz, H, Burgyan, J

Journal of General Virology1997

Genomic heterogeneity in the pol region of ovine lentiviruses obtained from bronchoalveolar cells of infected sheep from France

Leroux, Caroline, Vuillermoz, Sylvie, Mornex, Jean-Francois, Greenland, Timothy

Journal of General Virology1995

Expression of the beet yellows closterovirus capsid protein and p24, a capsid protein homologue, in vitro and in vivo

Agranovsky, A. A., Koenig, R., Maiss, E., Boyko, V. P., Casper, R., Atabekov, J. G.

Journal of General Virology1994

The Swedish new variant of Chlamydia trachomatis: genome sequence, morphology, cell tropism and phenotypic characterization

Magnus Unemo, Helena M. B. Seth-Smith, Lesley T. Cutcliffe, Rachel J. Skilton, David Barlow, David Goulding, et al.

Microbiology2010

Mitochondrial nucleoids from the yeast Candida parapsilosis: expansion of the repertoire of proteins associated with mitochondrial DNA

Miyakawa, Isamu, Okamuro, Akira, Kinsky, Slavomir, Visacka, Katarina, Tomaska, Lubomir, Nosek, Jozef

Microbiology2009

Molecular cloning and functional characterization of two CYP619 cytochrome P450s involved in biosynthesis of patulin in Aspergillus clavatus

Artigot, Marie Pierre, Loiseau, Nicolas, Laffitte, Joelle, Mas-Reguieg, Lina, Tadrist, Souria, Oswald, Isabelle P., et al.

Microbiology2009

Frequency and expression of mutacin biosynthesis genes in isolates of Streptococcus mutans with different mutacin-producing phenotypes

Kamiya, Regianne Umeko, Hofling, Jose Francisco, Goncalves, Reginaldo Bruno

Journal of Medical Microbiology2008

Complete genome sequence analysis of Seneca Valley virus-001, a novel oncolytic picornavirus

Hales, Laura M., Knowles, Nick J., Reddy, P. Seshidar, Xu, Ling, Hay, Carl, Hallenbeck, Paul L.

Journal of General Virology2008

Complete genome analysis of hepatitis C virus subtypes 6t and 6u

Noppornpanth, Suwanna, Poovorawan, Yong, Lien, Truong Xuan, Smits, Saskia L., Osterhaus, Albert D. M. E., Haagmans, Bart L.

Journal of General Virology2008

Analysis of the Mycobacterium ulcerans genome sequence reveals new loci for variable number tandem repeats (VNTR) typing

Hilty, Markus, Kaser, Michael, Zinsstag, Jakob, Stinear, Tim, Pluschke, Gerd

Microbiology2007

Isolation and partial characterization of the Streptococcus mutans type AII lantibiotic mutacin K8

Cynthia L. Robson, Philip A. Wescombe, Nikolai A. Klesse, John R. Tagg

Microbiology2007

Identification of two new Helicobacter pylori surface proteins involved in attachment to epithelial cell lines

Rubinsztein-Dunlop, Sebastian, Guy, Bruno, Lissolo, Ling, Fischer, Hans

Journal of Medical Microbiology2005

CAMP factor homologues in Propionibacterium acnes: a new protein family differentially expressed by types I and II

Valanne, Susanna, McDowell, Andrew, Ramage, Gordon, Tunney, Michael M., Einarsson, Gisli G., O'Hagan, Seamus, et al.

Microbiology2005

Overproduction, purification and characterization of FgaPT2, a dimethylallyltryptophan synthase from Aspergillus fumigatus

Unsold, Inge A., Li, Shu-Ming

Microbiology2005

Azotobacter vinelandii: a Pseudomonas in disguise?

Rediers, Hans, Vanderleyden, Jos, De Mot, Rene

Microbiology2004

Screening genomes of Gram-positive bacteria for double-glycine-motif-containing peptides

Dirix, G., Monsieurs, P., Marchal, K., Vanderleyden, J., Michiels, J.

Microbiology2004

Genetic content of wild-type human cytomegalovirus

Dolan, Aidan, Cunningham, Charles, Hector, Ralph D., Hassan-Walker, Aycan F., Lee, Lydia, Addison, Clare, et al.

Journal of General Virology2004

Distribution of type III secretion gene clusters in Burkholderia pseudomallei, B. thailandensis and B. mallei

RAINBOW, LUCILLE, HART, C. ANTHONY, WINSTANLEY, CRAIG

Journal of Medical Microbiology2002

Sample sequencing of a selected region of the genome of Erwinia carotovora subsp. atroseptica reveals candidate phytopathogenicity genes and allows comparison with Escherichia coli

Bell, Kenneth S., Avrova, Anna O., Holeva, Maria C., Cardle, Linda, Morris, Wayne, De Jong, Walter, et al.

Microbiology2002

Characterization of the hom-thrC-thrB cluster in aminoethoxyvinylglycine-producing Streptomyces sp. NRRL 5331

Fernandez, Monica, Cuadrado, Yolanda, Recio, Eliseo, Aparicio, Jesus F., Martin, Juan F.

Microbiology2002

Quorum sensing in Campylobacter jejuni: detection of a luxS encoded signalling molecule

Elvers, Karen T., Park, Simon F.

Microbiology2002

Eubacterial arylamine N-acetyltransferases - identification and comparison of 18 members of the protein family with conserved active site cysteine, histidine and aspartate residues

Payton, Mark, Mushtaq, Adeel, Yu, Tin-Wein, Wu, Ling-Juan, Sinclair, John, Sim, Edith

Microbiology2001

Nucleotide sequence of the 3'-terminal two-thirds of the grapevine leafroll-associated virus-3 genome reveals a typical monopartite closterovirus

Ling, KS, Zhu, HY, Drong, RF, Slightom, JL, McFerson, JR, Gonsalves, D

Journal of General Virology1998

An updated metabolic view of the Bacillus subtilis 168 genome

Eugeni Belda, Agnieszka Sekowska, François Le Fèvre, Anne Morgat, Damien Mornico, Christos Ouzounis, et al.

Microbiology2013